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Tunnel4J
Site: http://www.beanizer.org/index.php3?page=tunnel4j
A Java application for managing multiple SSH tunneling using Jsch
XOM
Site: http://www.xom.nu/
XOM™ is a new XML object model. It is an open source (LGPL), tree-based API for processing XML with Java that strives for correctness, simplicity, and performance, in that order.
JMatIO
Site: http://sourceforge.net/projects/jmatio
Matlab's MAT-file I/O API in JAVA. Supports Matlab 5 MAT-flie format reading and writing. Written in pure JAVA.
SciDelik
Site: http://scidelik.googlepages.com/home
SciDelik is an advanced scientific visualization and animation system based on Java and the 3D scenegraph graphics API, Java 3D, of Sun Microsystems, Inc. SciDelik has been under development for the past several years and is arguably the first full-featured, turnkey, scientific visualization package of its kind based on Java.
JMathLib
Site: http://mathlib.sourceforge.net/
JMathLib is meant to be a clone of Matlab, but written entirely in java.
A library of mathematical functions designed to be used in evaluating complex expressions and display the results graphically. It will be used either interactively through a terminal like window or to interpret script files.
It is intended to be a java version of programs such as MatLab, Octave and Scilab.
JavaRebel
Site: http://www.zeroturnaround.com/javarebel/
JavaRebel reloads changes to Java classes on-the-fly without redeploy or restart including new methods and fields. It is a generic solution that works for standalone Java applications as well as application servers.
Squish for Java
Site: http://www.froglogic.com/pg?id=Products&category=squish&sub=editions&subsub=java
The Squish for Java edition enables testing Java GUI applications based on SWT, RCP/Eclipse, Swing and AWT.